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CABRI Guidelines for Catalogue Production

Guidelines prepared for CABRI by BCCM, CBS, CERDIC, DSMZ, ECACC, HGMP, INRC, MSDN
Page layout by CERDIC


Data input & authentication Flat file preparation Flat file submission


Data input & authentication for plant cell lines

Data Sets

Data entry and validation

Scientific name

Family

Accession number

Strain designation

Depositor name and address

Culture conditions

Release conditions/Restrictions

Hazard

Additional information

Date of initiation

History


  1. Scientific name
  2. Field

    Scientific name

    Description

    botanical name of initial plant

    Input process

    Reference Lists:

    - Taxonomic references: H. Melchior (ed.), "A. Engler’s Syllabus der Planzenfamilien" Gebrüder Bornträger, Berlin 1964

    Required for

    MDS
  3. Family
  4. Field

    Family

    Description

    Family whose belong the initial plant

    Input process

    Reference Lists:

    - Taxonomic references: H. Melchior (ed.), "A. Engler’s Syllabus der Planzenfamilien" Gebrüder Bornträger, Berlin 1964

    Required for

    MDS
  5. Accession number
  6. Field

    Accession number

    Description

    Collection Number given to the cell line

    Input process

    automatically given, to avoid duplicates or absence of identifier

    Note

    a CABRI accession number is given, but only for internal purposes

    Required for

    MDS
  7. Strain designation
  8. Field

    Strain designation

    Description

    designations characterising the cell line

    Input process

    designations usually given by depositor or initiator

    Required for

    MDS
  9. Depositor name and address
  10. Field

    Depositor name and address

    Description

    depositor name
    address of the Institution

    Input process

    CABRI agreed list for country: name based on country code file retrieved from: ftp://ftp.ripe.net/iso3166-countrycodes
    updated by the RIPE Network Co-ordination Centre, in co-ordination with the ISO 3166 Maintenance Agency at DIN Berlin.

    Exception for UK, USA, USSR, Netherlands, North Korea

    Required for

    MDS
  11. Culture conditions
  12. Field

    Culture conditions

    Description

    - name of main cultivation medium (abbreviated)
    - recommended growth temperature (°C)
    - Humidity of growth chamber (%)
    - Light conditions (lux)
    - Light regime (hours)

    Input process

    Reference List:

    CABRI agreed list for abbreviated media: http://www.dsmz.de/media/media.htm

    Required for

    MDS
  13. Release conditions/Restrictions
  14. Field

    Release conditions/Restrictions

    Description

    Release conditions/Restrictions
    patents

    Input process

    release conditions/restrictions:

    value "no", or a text field describing the appropriate restrictions: hazard group, import/export regulations, .. The text may contain codes which refer to text files explaining the restrictions in more detail.

    patents: EPO standard rules

    Required for

    MDS
  15. Hazard/BioHazard
  16. Field

    Hazard/BioHazard

    Description

    hazard classification of the plant cell
    EU related hazard information rules
    country-specific related hazard information rules

    Input process

     See guidelines for Quality Management for Plant cell lines

    Required for

    MDS
  17. Additional information
  18. Field

    Additional information

    Description

    any additional information about the cell line

    Input process

    Free text

    Required for

    MDS
  19. Date of initiation
  20. Field

    Date of initiation

    Description

    date of culture initiation

    Input process

    Entered as dd.mm.yyyy

    Required for

    MDS
  21. History
  22. Field

    History

    Description

    history of the cell line before arrival at the resource centre

    Input process

     

    Required for

    MDS
 
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Site maintained by Paolo Romano. Last revised: March 2014.